STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M467_06235Unannotated protein. (301 aa)    
Predicted Functional Partners:
M467_09500
Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.679
M467_05510
Unannotated protein; Belongs to the carbohydrate kinase PfkB family.
  
  
 0.611
M467_06230
Unannotated protein.
       0.592
M467_06240
Unannotated protein.
       0.574
M467_11305
Unannotated protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
 
 0.551
lysS
Unannotated protein; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.492
tdh
Unannotated protein; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.
 
 
 0.472
M467_06360
Unannotated protein.
  
 
 0.466
M467_06225
Unannotated protein; Belongs to the UPF0761 family.
  
    0.415
asd
Unannotated protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
   
 
  0.412
Your Current Organism:
Exiguobacterium chiriqhucha
NCBI taxonomy Id: 1385984
Other names: E. chiriqhucha, Exiguobacterium pavilionensis, Exiguobacterium sp. GIC31, Exiguobacterium sp. N139, strain RW-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.