STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000472025_04674Unannotated protein. (255 aa)    
Predicted Functional Partners:
GCA_000472025_04668
Unannotated protein.
 
 
 0.841
GCA_000472025_04596
Unannotated protein.
 
   
 0.840
GCA_000472025_04666
Unannotated protein.
 
   
 0.838
GCA_000472025_04678
Unannotated protein.
 
  
  0.816
GCA_000472025_04667
Unannotated protein.
  
   
 0.789
GCA_000472025_04675
Unannotated protein.
       0.781
GCA_000472025_04441
Unannotated protein.
  
     0.771
GCA_000472025_01845
Unannotated protein.
  
     0.659
GCA_000472025_04690
Unannotated protein.
 
  
 0.649
GCA_000472025_00818
Unannotated protein.
  
  
 0.648
Your Current Organism:
Gordonia amicalis
NCBI taxonomy Id: 1386969
Other names: G. amicalis CCMA-559, Gordonia amicalis CCMA-559
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.