STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ08_0106Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (463 aa)    
Predicted Functional Partners:
AKJ08_0107
Chemotaxis protein methyltransferase CheR.
  
 
 0.767
AKJ08_2412
Omega-3 polyunsaturated fatty acid synthase.
  
 
 0.593
AKJ08_0105
Glycogen phosphorylase.
  
  
 0.567
AKJ08_3485
Putative zinc-binding dehydrogenase.
  
 
 0.556
AKJ08_0108
Hypothetical protein.
       0.510
AKJ08_2273
Alcohol dehydrogenase.
 
 0.473
AKJ08_3614
Long-chain-fatty-acid CoA ligase.
  
 
 0.465
AKJ08_0081
2-oxoglutarate oxidoreductase, alpha subunit.
   
 
 0.449
AKJ08_1693
Glutamate synthase [NADPH] small chain.
   
 
 0.429
AKJ08_2274
Glutamine synthetase family protein.
 
  
 0.426
Your Current Organism:
Vulgatibacter incomptus
NCBI taxonomy Id: 1391653
Other names: Cystobacteraceae bacterium B00001, DSM 27710, NBRC 109945, V. incomptus, Vulgatibacter incomptus Yamamoto et al. 2014, strain B00001
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