STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ08_1348Butyryl-CoA dehydrogenase. (379 aa)    
Predicted Functional Partners:
AKJ08_2751
Enoyl-CoA hydratase.
  
 0.928
AKJ08_2144
Electron transfer flavoprotein, alpha subunit.
 
 0.907
AKJ08_1349
Methylcrotonyl-CoA carboxylase carboxyl transferase subunit.
 
  
 0.836
AKJ08_1784
Long-chain-fatty-acid--CoA ligase.
 
  
 0.790
AKJ08_1347
Putative periplasmic protein kinase ArgK.
       0.776
AKJ08_2145
Electron transfer flavoprotein, beta subunit.
 
 
 0.709
AKJ08_2637
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.686
AKJ08_1358
Methylglutaconyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  0.682
AKJ08_1017
Benzoyl-CoA-dihydrodiol lyase.
  
  0.680
AKJ08_2412
Omega-3 polyunsaturated fatty acid synthase.
  
 0.624
Your Current Organism:
Vulgatibacter incomptus
NCBI taxonomy Id: 1391653
Other names: Cystobacteraceae bacterium B00001, DSM 27710, NBRC 109945, V. incomptus, Vulgatibacter incomptus Yamamoto et al. 2014, strain B00001
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.