STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU98710.1Transcriptional regulatory protein zraR. (120 aa)    
Predicted Functional Partners:
AKU98711.1
Formate hydrogenlyase transcriptional activator.
      
0.732
AKU98712.1
Nitrogen regulation protein NR(I).
 
    
0.638
AKU98727.1
Two-component hybrid sensor and regulator.
 
 
 0.553
AKU98709.1
Transcriptional regulator, AraC family.
       0.475
AKU93828.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
   
 
 0.471
AKU93819.1
Signal transduction histidine kinase CheA.
 
 
 0.457
AKU99679.1
Hypothetical protein.
  
     0.441
AKU97960.1
Signal transduction histidine kinase CheA.
 
 
 0.436
AKU94017.1
C4-dicarboxylate transport transcriptional regulatory protein.
  
     0.424
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.