STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000687915_00241Unannotated protein. (450 aa)    
Predicted Functional Partners:
GCA_000687915_00515
Unannotated protein.
  
 0.935
GCA_000687915_02520
Unannotated protein.
  
     0.726
GCA_000687915_01210
Unannotated protein.
    
  0.665
GCA_000687915_03057
Unannotated protein.
  
     0.638
GCA_000687915_00240
Unannotated protein.
 
     0.621
GCA_000687915_03450
Unannotated protein.
  
     0.617
GCA_000687915_03096
Unannotated protein.
  
     0.595
GCA_000687915_00811
Unannotated protein.
  
     0.584
GCA_000687915_00242
Unannotated protein.
       0.581
GCA_000687915_00162
Unannotated protein.
  
     0.530
Your Current Organism:
Flavimarina sp. HelI48
NCBI taxonomy Id: 1392488
Other names: F. sp. Hel_I_48, Flavimarina sp. Hel_I_48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.