STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000687915_02065Unannotated protein. (166 aa)    
Predicted Functional Partners:
GCA_000687915_01393
Unannotated protein.
 
     0.650
GCA_000687915_02066
Unannotated protein.
       0.647
GCA_000687915_02176
Unannotated protein.
  
     0.621
GCA_000687915_00659
Unannotated protein.
  
     0.560
GCA_000687915_00458
Unannotated protein.
  
     0.540
GCA_000687915_02931
Unannotated protein.
  
     0.506
GCA_000687915_03487
Unannotated protein.
  
     0.487
GCA_000687915_01875
Unannotated protein.
  
     0.483
GCA_000687915_00754
Unannotated protein.
  
     0.476
GCA_000687915_00221
Unannotated protein.
  
     0.474
Your Current Organism:
Flavimarina sp. HelI48
NCBI taxonomy Id: 1392488
Other names: F. sp. Hel_I_48, Flavimarina sp. Hel_I_48
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.