STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV29160.1Cu-processing system permease protein. (260 aa)    
Predicted Functional Partners:
SFV29169.1
Nitrous oxidase accessory protein.
 
 
 0.989
SFV29173.1
Copper chaperone NosL.
 
 
 0.989
SFV29165.1
Cu-processing system ATP-binding protein.
 
 0.987
SFV29178.1
Hypothetical protein.
 
 
 0.981
SFV29182.1
Nitrous-oxide reductase.
 
 
 0.969
SFV29156.1
Hypothetical protein.
 
     0.948
SFV29186.1
Putative heme-binding domain-containing protein.
 
     0.927
SFV27628.1
Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
 
     0.763
SFV27802.1
ABC-2 type transport system ATP-binding protein.
  
 0.743
SFV30155.1
ABC-2 type transport system ATP-binding protein.
  
 0.743
Your Current Organism:
Crenotalea thermophila
NCBI taxonomy Id: 1393122
Other names: C. thermophila, Chitinophagaceae bacterium STH-1-Y1, Crenotalea thermophila Hanada et al. 2014, DSM 14807, JCM 11541, strain STH-1-Y1
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