STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETB63917.1Gamma-D-glutamyl-(L)-meso-diaminopimelate peptidase I; RAAC4_OD1_1_367. (511 aa)    
Predicted Functional Partners:
ETB63916.1
Hypothetical protein; RAAC4_OD1_1_366.
 
    
0.634
ETB63995.1
Hypothetical protein; RAAC4_OD1_1_445.
 
     0.567
rpsR
Hypothetical protein; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.
       0.532
dnaJ
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
  
  
  0.520
ETB63571.1
Hypothetical protein; RAAC4_OD1_1_22.
 
     0.507
ETB63760.1
Hypothetical protein; RAAC4_OD1_1_211.
    
  0.437
ETB64079.1
Hypothetical protein; RAAC4_OD1_1_529.
    
  0.437
Your Current Organism:
Parcubacteria bacterium RAAC4OD11
NCBI taxonomy Id: 1394712
Other names: P. bacterium RAAC4_OD1_1, Parcubacteria bacterium RAAC4_OD1_1, candidate division OD1 bacterium RAAC4_OD1_1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.