STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETB63987.1Response regulator receiver protein; RAAC4_OD1_1_437. (132 aa)    
Predicted Functional Partners:
ETB64000.1
PAS/PAC sensor signal transduction histidine kinase; RAAC4_OD1_1_450.
 
 0.983
ETB63765.1
PAS/PAC sensor signal transduction histidine kinase; RAAC4_OD1_1_216.
 
 0.964
ETB63853.1
Signal transduction histidine kinase; RAAC4_OD1_1_304.
  
 0.940
ETB63709.1
Hypothetical protein; RAAC4_OD1_1_160.
    
 0.899
ETB64132.1
Integral membrane sensor signal transduction histidine kinase; RAAC4_OD1_1_582.
 
 0.838
ETB63986.1
Pilus retraction protein PilT; RAAC4_OD1_1_436.
     
 0.787
ETB63985.1
Hypothetical protein; RAAC4_OD1_1_435.
       0.778
ETB63990.1
Hypothetical protein; RAAC4_OD1_1_440.
       0.670
ETB63988.1
Type II secretion system protein E; RAAC4_OD1_1_438.
       0.665
ETB63992.1
Type IV pilus assembly protein PilM; RAAC4_OD1_1_442.
     
 0.663
Your Current Organism:
Parcubacteria bacterium RAAC4OD11
NCBI taxonomy Id: 1394712
Other names: P. bacterium RAAC4_OD1_1, Parcubacteria bacterium RAAC4_OD1_1, candidate division OD1 bacterium RAAC4_OD1_1
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