STRINGSTRING
pepT protein (Bacillus cereus) - STRING interaction network
"pepT" - Peptidase T in Bacillus cereus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepTPeptidase T; Cleaves the N-terminal amino acid of tripeptides; Belongs to the peptidase M20B family (410 aa)    
Predicted Functional Partners:
rpmE
L31- ribosomal protein L31 (81 aa)
           
  0.832
pyrB
Asp_carb_tr- aspartate carbamoyltransferase; Belongs to the ATCase/OTCase family (304 aa)
         
  0.814
pepX
Xaa-Pro dipeptidyl-peptidase; /NonD- hydrolase CocE/NonD family protein (597 aa)
           
  0.806
hemH1_2
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX; Belongs to the ferrochelatase family (319 aa)
         
  0.757
DJ87_264
annotation not available (365 aa)
     
 
  0.727
yxeP_1
Putative hydrolase YxeP (381 aa)
     
 
  0.700
DJ87_168
Dipeptidaselike- dipeptidase family protein (468 aa)
         
  0.682
BG11_5038
annotation not available (353 aa)
     
 
  0.598
DJ87_1054
annotation not available (356 aa)
     
 
  0.598
pyrP
annotation not available (427 aa)
           
  0.578
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
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