STRINGSTRING
pgdA_2 protein (Bacillus cereus) - STRING interaction network
"pgdA_2" - annotation not available in Bacillus cereus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgdA_2annotation not available (868 aa)    
Predicted Functional Partners:
cheA_1
annotation not available (670 aa)
   
   
  0.870
DJ87_4657
annotation not available (360 aa)
   
   
  0.844
rsbP_1
annotation not available (380 aa)
   
   
  0.795
DJ87_5445
annotation not available (735 aa)
   
   
  0.794
DJ87_1753
annotation not available (1193 aa)
 
   
  0.789
sunS_1
annotation not available (366 aa)
   
 
  0.778
cheV_1
annotation not available (302 aa)
   
   
  0.763
tuaG_4
annotation not available (853 aa)
   
 
0.757
hddC
annotation not available (784 aa)
   
 
  0.746
vioA_2
annotation not available (376 aa)
   
 
  0.742
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
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