STRINGSTRING
gdhB protein (Bacillus cereus) - STRING interaction network
"gdhB" - annotation not available in Bacillus cereus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gdhBannotation not available (261 aa)    
Predicted Functional Partners:
DJ87_155
Putative glucose uptake protein GlcU; rhaT- RhaT L-rhamnose-proton symporter family protein (285 aa)
 
     
  0.935
DJ87_154
Conserved hypothetical protein (139 aa)
              0.705
glcU_1
annotation not available (283 aa)
 
     
  0.617
mobB
mobB- molybdopterin-guanine dinucleotide biosynthesis protein B (166 aa)
         
  0.540
moaE_3
annotation not available (154 aa)
   
   
  0.534
gntT_1
gntP- transporter, gluconate-H+ symporter family protein (448 aa)
   
  0.528
moaD_3
Molybdopterin synthase sulfur carrier subunit; Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin (77 aa)
         
  0.524
dhbB
annotation not available (295 aa)
   
 
  0.502
moeA_3
Molybdopterin molybdenumtransferase; Molyb_syn- molybdenum cofactor synthesis domain protein (429 aa)
         
  0.502
rpe
Rpe- ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family (214 aa)
         
  0.497
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
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