STRINGSTRING
ctc_1 protein (Bacillus cereus) - STRING interaction network
"ctc_1" - S-layer protein in Bacillus cereus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctc_1S-layer protein (360 aa)    
Predicted Functional Partners:
csaB
Colanic acid biosynthesis protein; S_layer_CsaB- polysaccharide pyruvyl transferase CsaB (367 aa)
   
          0.779
DJ87_4192
Uncharacterized protein (123 aa)
   
          0.605
DJ87_1875
annotation not available (361 aa)
   
          0.548
DJ87_1970
annotation not available (133 aa)
   
 
      0.543
DJ87_1876
annotation not available (420 aa)
   
          0.529
DJ87_1798
annotation not available (213 aa)
   
          0.529
DJ87_4958
B_ant_repeat- conserved repeat domain protein (5010 aa)
 
          0.528
DJ87_1284
Uncharacterized protein (356 aa)
 
          0.522
DJ87_4191
Uncharacterized protein (293 aa)
 
          0.516
DJ87_2987
annotation not available (181 aa)
   
          0.514
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
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