STRINGSTRING
ytpP_1 protein (Bacillus cereus) - STRING interaction network
"ytpP_1" - annotation not available in Bacillus cereus
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ytpP_1annotation not available (104 aa)    
Predicted Functional Partners:
trxA
Thioredoxin- thioredoxin; Belongs to the thioredoxin family (104 aa)
         
  0.809
pheT_1
annotation not available (201 aa)
         
  0.795
DJ87_179
UPF0354 protein BN2127_JRS1_01466; Belongs to the UPF0354 family (270 aa)
         
  0.777
DJ87_177
Non-canonical purine NTP phosphatase (169 aa)
              0.668
trxB
TRX_reduct- thioredoxin-disulfide reductase; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family (318 aa)
   
 
  0.662
yqeH
GTPase_YqeH- ribosome biogenesis GTPase YqeH (368 aa)
   
      0.616
rpoE
Probable DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling (177 aa)
 
          0.614
trxA_3
annotation not available (99 aa)
           
  0.546
DJ87_5550
annotation not available (104 aa)
           
  0.530
DJ87_1895
annotation not available (159 aa)
   
     
  0.522
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
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