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ydbM_1 protein (Bacillus cereus) - STRING interaction network
"ydbM_1" - acyl-CoA dehydrogenase, N-terminal domain protein in Bacillus cereus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydbM_1acyl-CoA dehydrogenase, N-terminal domain protein (382 aa)    
Predicted Functional Partners:
acrA
annotation not available (325 aa)
 
  0.805
etfB
annotation not available (257 aa)
 
 
  0.749
fadN_1
annotation not available (793 aa)
 
 
  0.666
fadB_2
annotation not available (258 aa)
 
 
  0.589
DJ87_2329
annotation not available (262 aa)
 
 
  0.567
ybgC_1
annotation not available (139 aa)
         
  0.543
mmgB_2
annotation not available (283 aa)
 
   
  0.531
acsA_2
annotation not available (646 aa)
 
   
  0.521
BG11_652
Vancomycin high temperature exclusion protein (210 aa)
              0.507
paaF_2
annotation not available (262 aa)
 
 
  0.496
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
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