STRINGSTRING
DJ87_1944 protein (Bacillus cereus) - STRING interaction network
"DJ87_1944" - annotation not available in Bacillus cereus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ87_1944annotation not available (488 aa)    
Predicted Functional Partners:
DJ87_5445
annotation not available (735 aa)
   
 
  0.732
prkC
annotation not available (657 aa)
 
 
 
  0.679
DJ87_2637
annotation not available (316 aa)
 
          0.578
sigH
spore_sigH- RNA polymerase sigma-H factor; Belongs to the sigma-70 factor family (218 aa)
 
        0.546
DJ87_4016
annotation not available (485 aa)
 
     
  0.529
ksgA
Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (292 aa)
 
     
  0.521
yycF
annotation not available (234 aa)
           
  0.520
DJ87_2611
annotation not available (1400 aa)
   
 
  0.513
DJ87_1179
1-phosphatidylinositol phosphodiesterase; Cleaves glycosylphosphatidylinositol (GPI) and phosphatidylinositol (PI) anchors but not PI phosphates (329 aa)
 
 
 
  0.510
smc_5
Chromosome partition protein Smc; LPXTG_anchor- LPXTG cell wall anchor domain protein (372 aa)
 
          0.499
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
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