STRINGSTRING
rppH_5 protein (Bacillus cereus) - STRING interaction network
"rppH_5" - annotation not available in Bacillus cereus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rppH_5annotation not available (148 aa)    
Predicted Functional Partners:
DJ87_2205
annotation not available (112 aa)
   
        0.774
bltD_2
annotation not available (152 aa)
 
        0.740
pgcA
annotation not available (574 aa)
   
   
  0.603
rnjA
Ribonuclease J; An RNase that has 5’-3’ exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay; Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. Bacterial RNase J subfamily (555 aa)
           
  0.594
yhaM
3’-5’ exoribonuclease YhaM; Shows a 3’-5’ exoribonuclease activity (314 aa)
           
  0.591
nudC_2
annotation not available (147 aa)
 
          0.588
DJ87_2198
annotation not available (141 aa)
 
        0.513
DJ87_2207
annotation not available (303 aa)
              0.467
DJ87_2203
B_an_ocin- putative heterocycle-containing bacteriocin, BA_2677 family (85 aa)
              0.466
DJ87_2091
annotation not available (138 aa)
   
        0.460
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
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