STRINGSTRING
pbpH_4 protein (Bacillus cereus) - STRING interaction network
"pbpH_4" - annotation not available in Bacillus cereus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pbpH_4annotation not available (697 aa)    
Predicted Functional Partners:
rodA_2
annotation not available (392 aa)
 
  0.787
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family (436 aa)
 
 
  0.766
mreC
Cell shape-determining protein MreC; Involved in formation and maintenance of cell shape (283 aa)
 
 
  0.760
DJ87_5413
PBP_1a_fam- penicillin-binding , 1A family protein (900 aa)
 
 
  0.721
ponA_1
PBP_1a_fam- penicillin-binding , 1A family protein (837 aa)
 
 
  0.714
DJ87_192
annotation not available (338 aa)
   
          0.652
ezrA
Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization (570 aa)
   
     
  0.651
BG03_5365
mreB- cell shape determining , MreB/Mrl family protein (333 aa)
 
 
  0.641
ftsW_3
annotation not available (392 aa)
 
  0.627
comGC_1
ComG operon protein 3; Required for transformation and DNA binding (99 aa)
 
          0.627
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
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