STRINGSTRING
prpD protein (Bacillus cereus) - STRING interaction network
prpD: 2-methylcitrate dehydratase in Bacillus cereus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prpDprpD- 2-methylcitrate dehydratase (478 aa)    
Predicted Functional Partners:
prpB
prpB- methylisocitrate lyase (302 aa)
 
   
  0.991
mmgD
annotation not available (372 aa)
 
  0.944
BG03_4507
gly_Cac_T_rel- pyridoxal phosphate-dependent acyltransferase family protein (396 aa)
           
  0.828
DJ87_4752
annotation not available (274 aa)
 
   
  0.763
citZ
annotation not available (371 aa)
 
  0.730
BG03_4060
DUF1878 domain-containing protein (111 aa)
           
  0.593
groL
60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions; Belongs to the chaperonin (HSP60) family (544 aa)
           
  0.530
fadE_2
acyl-CoA dehydrogenase, N-terminal domain protein (569 aa)
   
        0.507
hgd
annotation not available (296 aa)
              0.485
nrdD
nrdD- anaerobic ribonucleoside-triphosphate reductase (618 aa)
           
  0.481
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
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