STRINGSTRING
sirB_2 protein (Bacillus cereus) - STRING interaction network
"sirB_2" - annotation not available in Bacillus cereus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sirB_2annotation not available (236 aa)    
Predicted Functional Partners:
narT_1
annotation not available (389 aa)
   
        0.989
nasF_1
cobA_cysG_Cterm- uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family (474 aa)
   
  0.975
sirC_2
Precorrin-2 dehydrogenase; cysG_Nterm- siroheme synthase, N-terminal domain protein (157 aa)
 
     
  0.892
nirD
nirD_assim_sml- nitrite reductase [NAD(P)H], small subunit (105 aa)
 
   
  0.882
nirB
nitri_red_nirB- nitrite reductase [NAD(P)H], large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family (801 aa)
 
   
  0.769
sumT_1
cobA_cysG_Cterm- uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family (258 aa)
   
  0.636
sir
annotation not available (540 aa)
 
   
  0.521
cysH
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite; Belongs to the PAPS reductase family. CysH subfamily (234 aa)
 
   
  0.458
hemA
Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA); Belongs to the glutamyl-tRNA reductase family (444 aa)
 
   
  0.428
narH
narH- nitrate reductase, beta subunit (491 aa)
     
        0.410
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
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