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sigW_5 protein (Bacillus cereus) - STRING interaction network
"sigW_5" - sigma70-ECF: RNA polymerase sigma factor, sigma-70 family protein in Bacillus cereus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sigW_5sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein (192 aa)    
Predicted Functional Partners:
DJ87_2666
Conserved hypothetical protein (226 aa)
 
          0.905
sigW_2
sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein (160 aa)
   
          0.732
sigM_2
sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein (185 aa)
   
          0.694
sigM_1
sigM_subfam- RNA polymerase sigma factor, SigM family protein; Belongs to the sigma-70 factor family. ECF subfamily (161 aa)
   
          0.625
DJ87_5180
sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein (163 aa)
   
          0.564
DJ87_259
sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein (169 aa)
   
          0.529
DJ87_2669
annotation not available (212 aa)
 
          0.529
qorA_2
annotation not available (328 aa)
              0.518
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
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