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yycF_5 protein (Bacillus cereus) - STRING interaction network
"yycF_5" - Transcriptional regulatory , C terminal family protein in Bacillus cereus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yycF_5Transcriptional regulatory , C terminal family protein (232 aa)    
Predicted Functional Partners:
DJ87_2949
annotation not available (358 aa)
 
      0.970
phoR_7
annotation not available (603 aa)
 
  0.821
phoR_8
annotation not available (180 aa)
 
 
      0.814
DJ87_2876
annotation not available (357 aa)
 
      0.784
DJ87_4954
annotation not available (615 aa)
 
      0.781
DJ87_2320
annotation not available (385 aa)
 
 
      0.778
DJ87_4767
annotation not available (502 aa)
 
  0.777
phoR_5
annotation not available (501 aa)
 
  0.772
baeS_1
annotation not available (466 aa)
 
  0.769
phoR_4
annotation not available (463 aa)
 
 
  0.738
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
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