STRINGSTRING
emrK protein (Bacillus cereus) - STRING interaction network
"emrK" - annotation not available in Bacillus cereus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emrKannotation not available (217 aa)    
Predicted Functional Partners:
emrB_1
Multidrug export protein EmrB; efflux_EmrB- drug resistance MFS transporter, drug-H+ antiporter-2 family protein; Belongs to the major facilitator superfamily (599 aa)
 
 
  0.944
bcr_1
Bicyclomycin resistance protein; efflux_Bcr_CflA- drug resistance transporter, Bcr/CflA subfamily protein (398 aa)
 
 
  0.850
tepA_1
annotation not available (249 aa)
           
  0.804
DJ87_3338
DinB superfamily protein (177 aa)
           
  0.591
BG11_477
DUF378 domain-containing protein (63 aa)
           
  0.591
acrA
annotation not available (325 aa)
           
  0.590
DJ87_4244
efflux_EmrB- drug resistance MFS transporter, drug-H+ antiporter-2 family protein (480 aa)
 
 
  0.500
citN
annotation not available (434 aa)
           
  0.459
pcp
Pyrrolidone-carboxylate peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family (215 aa)
           
  0.459
amyX_1
Pullulanase; pulA_typeI- pullulanase, type I; Belongs to the glycosyl hydrolase 13 family (713 aa)
           
  0.456
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
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