STRINGSTRING
yxlF_7 protein (Bacillus cereus) - STRING interaction network
"yxlF_7" - annotation not available in Bacillus cereus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yxlF_7annotation not available (300 aa)    
Predicted Functional Partners:
DJ87_3316
annotation not available (258 aa)
 
        0.917
yxlF_8
annotation not available (232 aa)
 
       
0.845
ytrA_2
HTH-type transcriptional repressor YtrA; Iron dependent repressor, N-terminal DNA binding domain protein (126 aa)
         
  0.832
DJ87_3318
annotation not available (262 aa)
              0.821
DJ87_3802
annotation not available (330 aa)
 
   
  0.531
DJ87_4639
serS- serine--tRNA ligase (427 aa)
 
          0.520
DJ87_3315
annotation not available (337 aa)
     
      0.504
DJ87_1272
annotation not available (314 aa)
 
   
  0.494
DJ87_3321
annotation not available (133 aa)
              0.447
cysS
cysS- cysteine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family (465 aa)
 
        0.446
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
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