STRINGSTRING
sspD protein (Bacillus cereus) - STRING interaction network
"sspD" - annotation not available in Bacillus cereus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sspDannotation not available (61 aa)    
Predicted Functional Partners:
sspF
Protein SspF; May play some important role in either sporulation or the dormant spore (59 aa)
   
     
  0.743
spoVB
spore_V_B- stage V sporulation protein B (519 aa)
   
     
  0.726
cotE
annotation not available (180 aa)
   
     
  0.710
yabP
spore_yabP- sporulation protein YabP (102 aa)
   
     
  0.681
gerAA_5
annotation not available (490 aa)
   
          0.674
DJ87_5803
annotation not available (77 aa)
   
          0.618
sspI
SASP_sspI- small, acid-soluble spore protein I; Belongs to the SspI family (69 aa)
   
     
  0.603
lytH_1
annotation not available (327 aa)
   
          0.599
cotF
annotation not available (160 aa)
           
  0.590
tlp
SASP_tlp- small, acid-soluble spore protein tlp; Belongs to the Tlp family (65 aa)
           
  0.590
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
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