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BG03_4060 protein (Bacillus cereus) - STRING interaction network
"BG03_4060" - DUF1878 domain-containing protein in Bacillus cereus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BG03_4060DUF1878 domain-containing protein (111 aa)    
Predicted Functional Partners:
BG03_491
annotation not available (92 aa)
   
          0.756
BG03_1098
DUF2552 domain-containing protein (81 aa)
   
          0.741
DJ87_4490
annotation not available (627 aa)
   
          0.739
DJ87_5582
Conserved hypothetical protein (74 aa)
   
          0.719
BG03_4507
gly_Cac_T_rel- pyridoxal phosphate-dependent acyltransferase family protein (396 aa)
           
  0.690
BG11_1522
DUF2535 domain-containing protein (83 aa)
   
          0.676
BG03_4343
annotation not available (82 aa)
   
          0.672
gerPC
Probable spore germination protein GerPC; Required for the formation of functionally normal spores. Could be involved in the establishment of normal spore coat structure and/or permeability, which allows the access of germinants to their receptor (204 aa)
   
          0.670
ytrI_1
Sporulation membrane protein YtrI (167 aa)
   
          0.670
DJ87_865
annotation not available (152 aa)
   
          0.652
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
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