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ydaM_1 protein (Bacillus cereus) - STRING interaction network
"ydaM_1" - GGDEF: diguanylate cyclase domain protein in Bacillus cereus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydaM_1GGDEF- diguanylate cyclase domain protein (348 aa)    
Predicted Functional Partners:
DJ87_4111
annotation not available (374 aa)
 
  0.895
DJ87_1185
annotation not available (243 aa)
 
 
  0.846
gmr_4
Cyclic di-GMP phosphodiesterase Gmr; GGDEF- diguanylate cyclase domain protein (689 aa)
 
 
  0.832
cheA_1
annotation not available (670 aa)
 
 
  0.788
cheV_1
annotation not available (302 aa)
 
 
 
  0.729
cph2
Phytochrome-like protein cph2; GGDEF- diguanylate cyclase domain protein (652 aa)
 
 
0.519
DJ87_3786
Uncharacterized protein (67 aa)
              0.513
cstA_1
annotation not available (691 aa)
              0.513
DJ87_4653
GGDEF- diguanylate cyclase domain protein (925 aa)
 
 
0.512
gmr_1
Cyclic di-GMP phosphodiesterase Gmr; GGDEF- diguanylate cyclase domain protein (567 aa)
 
 
0.512
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
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