STRINGSTRING
sigK_1 protein (Bacillus cereus) - STRING interaction network
"sigK_1" - sigma70-ECF: RNA polymerase sigma factor, sigma-70 family protein in Bacillus cereus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sigK_1sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein (156 aa)    
Predicted Functional Partners:
DJ87_3518
annotation not available (290 aa)
   
          0.696
spo0B_1
annotation not available (182 aa)
   
          0.625
DJ87_3739
annotation not available (61 aa)
   
          0.614
DJ87_3157
Uncharacterized protein (153 aa)
   
          0.612
DJ87_3808
Uncharacterized protein (94 aa)
   
          0.601
BG03_4675
Uncharacterized protein (60 aa)
   
          0.598
sirA_1
Sporulation inhibitor of replication protein SirA (146 aa)
   
          0.589
DJ87_5581
annotation not available (55 aa)
   
          0.562
DJ87_4626
annotation not available (202 aa)
 
          0.552
ypjB
spore_ypjB- sporulation protein YpjB (262 aa)
   
          0.545
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
Server load: low (11%) [HD]