STRINGSTRING
DJ87_3960 protein (Bacillus cereus) - STRING interaction network
"DJ87_3960" - annotation not available in Bacillus cereus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ87_3960annotation not available (539 aa)    
Predicted Functional Partners:
rapA_1
RNA polymerase-associated protein RapA; SNF2 family N-terminal domain protein (918 aa)
 
          0.886
DJ87_1371
annotation not available (1120 aa)
 
          0.758
DJ87_655
Uncharacterized protein (280 aa)
   
          0.734
DJ87_3214
Uncharacterized protein (262 aa)
   
          0.726
B4077_1268
Histidinol dehydrogenase (138 aa)
   
          0.720
DJ87_1948
annotation not available (1160 aa)
   
          0.708
DJ87_3808
Uncharacterized protein (94 aa)
   
          0.704
spoIIB_1
annotation not available (320 aa)
   
          0.700
ycf3_1
annotation not available (503 aa)
   
          0.694
gerPE_1
annotation not available (128 aa)
   
          0.692
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
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