STRINGSTRING
csaB protein (Bacillus cereus) - STRING interaction network
"csaB" - Colanic acid biosynthesis protein in Bacillus cereus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csaBColanic acid biosynthesis protein; S_layer_CsaB- polysaccharide pyruvyl transferase CsaB (367 aa)    
Predicted Functional Partners:
sap
annotation not available (822 aa)
   
     
  0.916
ytgP_4
annotation not available (506 aa)
 
   
  0.839
DJ87_5676
Conserved hypothetical protein (444 aa)
 
     
  0.794
DJ87_3693
Conserved hypothetical protein (376 aa)
 
     
  0.792
DJ87_75
Endoglucanase (272 aa)
 
     
  0.790
sap_6
S-layer protein sap (219 aa)
   
          0.783
sap_5
S-layer protein sap (223 aa)
   
          0.781
DJ87_3563
Conserved hypothetical protein (219 aa)
   
          0.779
ctc_1
S-layer protein (360 aa)
   
          0.779
tagA_1
N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid (246 aa)
     
  0.776
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
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