STRINGSTRING
yxdM_1 protein (Bacillus cereus) - STRING interaction network
"yxdM_1" - annotation not available in Bacillus cereus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yxdM_1annotation not available (637 aa)    
Predicted Functional Partners:
yxdL_1
annotation not available (258 aa)
 
 
  0.908
graS_1
annotation not available (353 aa)
 
 
 
  0.889
B4079_0590
Two-component system response regulator; Transcriptional regulatory , C terminal family protein (235 aa)
 
   
  0.839
graS_2
annotation not available (340 aa)
 
 
 
  0.770
yxdM_2
annotation not available (640 aa)
 
       
0.712
graS_3
annotation not available (327 aa)
 
 
 
  0.689
yxdL_2
annotation not available (250 aa)
 
 
  0.680
DJ87_2683
Put_anti_recept- phage minor structural , N-terminal region domain protein (1337 aa)
   
          0.671
DJ87_2278
annotation not available (256 aa)
 
 
  0.657
graR_2
annotation not available (231 aa)
 
   
  0.644
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
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