STRINGSTRING
gerLA protein (Bacillus cereus) - STRING interaction network
"gerLA" - Spore germination protein GerLA in Bacillus cereus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gerLASpore germination protein GerLA; Contributes to the L-alanine germination response (489 aa)    
Predicted Functional Partners:
gerLC
Spore germination protein GerLC; Contributes to the L-alanine germination response (331 aa)
 
     
  0.991
gerLB
Spore germination protein GerLB; Contributes to the L-alanine germination response (374 aa)
 
     
  0.989
DJ87_787
SpoVA protein; spore_V_AC- stage V sporulation protein AC (152 aa)
 
     
  0.792
spoIVA
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat (492 aa)
   
      0.788
DJ87_5785
annotation not available (82 aa)
 
     
  0.788
spoVAD_1
spore_V_AD- stage V sporulation protein AD (338 aa)
 
   
  0.782
DJ87_5784
spore_V_AD- stage V sporulation protein AD (338 aa)
 
   
  0.782
DJ87_4063
SpoVA protein; spore_V_AC- stage V sporulation protein AC (158 aa)
 
     
  0.780
BG11_5165
spore_V_AE- stage V sporulation protein AE (116 aa)
 
          0.779
BG03_56
spore_V_AE- stage V sporulation protein AE (116 aa)
 
          0.778
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
Server load: low (20%) [HD]