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spoVB protein (Bacillus cereus) - STRING interaction network
"spoVB" - spore_V_B: stage V sporulation protein B in Bacillus cereus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spoVBspore_V_B- stage V sporulation protein B (519 aa)    
Predicted Functional Partners:
ylbJ
spore_ylbJ- sporulation integral membrane protein YlbJ (409 aa)
   
     
  0.816
yqfD
spore_yqfD- sporulation protein YqfD (399 aa)
 
   
  0.799
yabP
spore_yabP- sporulation protein YabP (102 aa)
 
     
  0.789
yabQ
spore_yabQ- spore cortex biosynthesis protein YabQ (217 aa)
 
     
  0.769
spoVD_1
spoVD_pbp- stage V sporulation protein D (638 aa)
   
     
  0.734
yqfC
spore_yqfC- sporulation protein YqfC (97 aa)
   
     
  0.726
sspD
annotation not available (61 aa)
   
     
  0.726
ftsW
ftsW- cell division protein FtsW; Belongs to the SEDS family (363 aa)
   
     
  0.725
ypjB
spore_ypjB- sporulation protein YpjB (262 aa)
   
     
  0.699
spoIVFB
annotation not available (286 aa)
   
   
  0.691
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
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