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ndoA protein (Bacillus cereus) - STRING interaction network
"ndoA" - mRNA interferase in Bacillus cereus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ndoAmRNA interferase; Toxic component of a toxin-antitoxin (TA) module (116 aa)    
Predicted Functional Partners:
ndoAI
annotation not available (95 aa)
   
 
  0.979
rpsA_2
annotation not available (722 aa)
              0.755
sigB
sigma_B- RNA polymerase sigma-B factor; Belongs to the sigma-70 factor family (258 aa)
 
     
  0.729
DJ87_3034
annotation not available (137 aa)
           
  0.691
thrS_1
Threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction- L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) (645 aa)
           
  0.637
thrZ_1
Threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction- L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) (639 aa)
           
  0.637
DJ87_1275
annotation not available (235 aa)
         
  0.592
lsrR
annotation not available (315 aa)
           
  0.592
lsrK
annotation not available (520 aa)
           
  0.591
spoVT
Stage V sporulation protein T, AbrB family transcriptional regulator (SpoVT); spore_V_T- stage V sporulation protein T (178 aa)
 
     
  0.584
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
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