STRINGSTRING
uvsE_1 protein (Bacillus cereus) - STRING interaction network
"uvsE_1" - Uvde: UV damage endonuclease UvdE in Bacillus cereus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uvsE_1Uvde- UV damage endonuclease UvdE (320 aa)    
Predicted Functional Partners:
cshA
DEAD-box ATP-dependent RNA helicase CshA; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5’- and 3’-directions, has RNA- dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily (525 aa)
         
  0.821
cshA_2
DEAD-box ATP-dependent RNA helicase CshA; Helicase conserved C-terminal domain protein (389 aa)
           
  0.591
cshA_1
DEAD-box ATP-dependent RNA helicase CshA; SNF2 family N-terminal domain protein (454 aa)
           
  0.591
tilS
tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine; Belongs to the tRNA(Ile)-lysidine synthase family (476 aa)
           
  0.590
tetR_2
annotation not available (185 aa)
           
  0.590
BG03_4800
annotation not available (54 aa)
           
  0.590
yxdL_1
annotation not available (258 aa)
           
  0.590
colA_2
annotation not available (971 aa)
           
  0.590
DJ87_2089
annotation not available (170 aa)
           
  0.526
phoB
annotation not available (461 aa)
           
  0.507
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
Server load: low (13%) [HD]