STRINGSTRING
sda protein (Bacillus cereus) - STRING interaction network
"sda" - annotation not available in Bacillus cereus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sdaannotation not available (51 aa)    
Predicted Functional Partners:
BG11_3216
annotation not available (134 aa)
   
          0.682
DJ87_5582
Conserved hypothetical protein (74 aa)
   
          0.655
DJ87_1137
annotation not available (67 aa)
   
          0.636
yhaL
annotation not available (66 aa)
   
          0.633
BG11_5141
Membrane protein (76 aa)
   
          0.625
DJ87_5521
annotation not available (920 aa)
   
          0.621
DJ87_3177
annotation not available (203 aa)
   
          0.611
ytrI_1
Sporulation membrane protein YtrI (167 aa)
   
          0.592
repX
Plasmid replication protein RepX; Probable plasmid replication initiator protein. It is essential for plasmid replication (By similarity) (435 aa)
           
  0.590
DJ87_928
annotation not available (149 aa)
   
          0.589
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
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