STRINGSTRING
dacA_3 protein (Bacillus cereus) - STRING interaction network
"dacA_3" - annotation not available in Bacillus cereus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dacA_3annotation not available (417 aa)    
Predicted Functional Partners:
dacB
annotation not available (374 aa)
 
   
0.860
dacF_1
annotation not available (396 aa)
   
   
0.853
DJ87_5413
PBP_1a_fam- penicillin-binding , 1A family protein (900 aa)
         
  0.828
pbpF_1
PBP_1a_fam- penicillin-binding , 1A family protein (705 aa)
         
  0.828
pbpF_2
PBP_1a_fam- penicillin-binding , 1A family protein (680 aa)
         
  0.828
ponA_1
PBP_1a_fam- penicillin-binding , 1A family protein (837 aa)
         
  0.828
vanYB_1
annotation not available (259 aa)
       
  0.816
vanY_1
annotation not available (286 aa)
       
  0.811
clpC
annotation not available (810 aa)
       
    0.802
pdxS
Pyridoxal 5’-phosphate synthase subunit PdxS; Catalyzes the formation of pyridoxal 5’-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively; Belongs to the PdxS/SNZ family (295 aa)
              0.663
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
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