STRINGSTRING
tnp protein (Bacillus cereus) - STRING interaction network
"tnp" - Transposase for Tn1546 domain protein in Bacillus cereus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnpTransposase for Tn1546 domain protein (109 aa)    
Predicted Functional Partners:
DJ87_4968
annotation not available (246 aa)
          0.983
DJ87_4086
annotation not available (246 aa)
 
          0.970
DJ87_5771
Conserved hypothetical protein (115 aa)
          0.939
DJ87_5772
Conserved hypothetical protein (90 aa)
          0.892
DJ87_5774
Conserved hypothetical protein (499 aa)
 
          0.846
DJ87_1435
annotation not available (76 aa)
 
          0.835
bcp_1
annotation not available (151 aa)
           
  0.810
DJ87_4073
annotation not available (1017 aa)
   
          0.783
DJ87_2510
annotation not available (76 aa)
           
  0.690
cidA_1
annotation not available (122 aa)
           
  0.591
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
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