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DJ87_5778 protein (Bacillus cereus) - STRING interaction network
"DJ87_5778" - spore_ger_x_C: germination , Ger(x)C family protein in Bacillus cereus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ87_5778spore_ger_x_C- germination , Ger(x)C family protein (376 aa)    
Predicted Functional Partners:
DJ87_5777
2A0309- spore germination family protein (364 aa)
 
          0.967
DJ87_5776
annotation not available (208 aa)
 
          0.930
DJ87_5775
annotation not available (270 aa)
 
          0.855
yndE_5
annotation not available (225 aa)
 
          0.664
DJ87_4324
annotation not available (144 aa)
 
          0.655
yndE_7
2A0309- spore germination family protein (366 aa)
 
          0.630
DJ87_4960
spore_ger_x_C- germination , Ger(x)C family protein (384 aa)
   
          0.558
DJ87_1374
2A0309- spore germination family protein (365 aa)
 
          0.498
DJ87_5773
annotation not available (73 aa)
              0.489
DJ87_4066
Conserved hypothetical protein (182 aa)
   
          0.453
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
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