STRINGSTRING
cof protein (Bacillus cereus) - STRING interaction network
"cof" - HMP-PP phosphatase in Bacillus cereus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cofHMP-PP phosphatase; HAD-SF-IIB- HAD hydrolase, IIB family protein (268 aa)    
Predicted Functional Partners:
DJ87_2408
HAD-SF-IIB- HAD hydrolase, IIB family protein (257 aa)
   
          0.722
DJ87_2763
Sugar phosphatase YidA; Cof-sub- Cof-like hydrolase family protein (258 aa)
   
          0.706
yidA_1
Haloacid dehalogenase-like hydrolase; HAD-SF-IIB- HAD hydrolase, IIB family protein (269 aa)
   
          0.681
def2
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (184 aa)
   
   
  0.608
argS_1
argS- arginine--tRNA ligase (556 aa)
   
   
  0.608
argS_2
argS- arginine--tRNA ligase (562 aa)
   
   
  0.608
ptsG
annotation not available (687 aa)
 
     
  0.605
xerC
recomb_XerD- tyrosine recombinase XerD (299 aa)
           
  0.593
cyoE
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group (307 aa)
     
   
  0.580
DJ87_806
annotation not available (75 aa)
              0.557
Your Current Organism:
Bacillus cereus
NCBI taxonomy Id: 1396
Other names: ATCC 14579, B. cereus, BCRC 10603, Bacillus cereus, Bacillus endorhythmos, Bacillus medusa, Bacillus sp. 2479, Bacillus sp. BS2(2013b), Bacillus sp. BV4, Bacillus sp. JKR50, Bacillus sp. JKR62, Bacillus sp. JP44SK22, Bacillus sp. JP44SK37, Bacillus sp. JP44SK43, Bacillus sp. JP44SK45, Bacillus sp. JSG1(2014), Bacillus sp. KER 17, Bacillus sp. MZ-01, Bacillus sp. PXDK-1, Bacillus sp. Pf-1, Bacillus sp. V3, Bacillus sp. mmm86, CCM 2010, CCRC 10603, CCUG 7414, CIP 66.24, DSM 31, IAM 12605, IFO 15305, JCM 2152, LMG 6923, NBRC 15305, NCCB 75008, NCIMB 9373, NCTC 2599, NRRL B-3711, VKM B-504
Server load: low (14%) [HD]