STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000633435_00046Unannotated protein. (307 aa)    
Predicted Functional Partners:
GCA_000633435_00045
Unannotated protein.
 
  
 0.992
GCA_000633435_00044
Unannotated protein.
 
   
 0.945
GCA_000633435_00043
Unannotated protein.
 
   
 0.900
GCA_000633435_00042
Unannotated protein.
 
     0.620
GCA_000633435_00751
Unannotated protein.
  
   
 0.537
GCA_000633435_00047
Unannotated protein.
       0.465
GCA_000633435_01779
Unannotated protein.
    
 0.461
GCA_000633435_00527
Unannotated protein.
     
 0.449
GCA_000633435_00728
Unannotated protein.
     
 0.449
GCA_000633435_00911
Unannotated protein.
     
 0.449
Your Current Organism:
Achromobacter sp. DH1f
NCBI taxonomy Id: 1397275
Other names: A. sp. DH1f, Alcaligenes sp. DH1f
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.