STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000633435_06104Unannotated protein. (488 aa)    
Predicted Functional Partners:
GCA_000633435_06105
Unannotated protein.
 
    
0.795
GCA_000633435_03737
Unannotated protein.
  
     0.738
GCA_000633435_03736
Unannotated protein.
 
     0.728
GCA_000633435_05738
Unannotated protein.
 
     0.727
GCA_000633435_00398
Unannotated protein.
 
     0.668
GCA_000633435_03741
Unannotated protein.
 
     0.512
GCA_000633435_03735
Unannotated protein.
  
     0.470
GCA_000633435_05898
Unannotated protein.
 
     0.468
GCA_000633435_03744
Unannotated protein.
 
     0.443
GCA_000633435_06103
Unannotated protein.
       0.421
Your Current Organism:
Achromobacter sp. DH1f
NCBI taxonomy Id: 1397275
Other names: A. sp. DH1f, Alcaligenes sp. DH1f
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.