STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dacFPenicillin-binding protein dacF; Belongs to the peptidase S11 family. (270 aa)    
Predicted Functional Partners:
P857_736
Cell division protein FtsI.
 
 
 0.865
P857_44
Hypothetical protein.
  
   0.838
P857_405
Penicillin binding transpeptidase domain protein.
  
 
 0.624
P857_975
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase.
  
 
 0.569
mraY
phospho-N-acetylmuramoyl-pentapeptide-transferas e; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
  
 
 0.568
mrcA
Penicillin-binding protein 1A.
     
 0.566
P857_40
LD-carboxypeptidase family protein.
    
 0.548
hsp18
18 kDa heat shock protein; Belongs to the small heat shock protein (HSP20) family.
       0.406
Your Current Organism:
Xenolissoclinum pacificiensis
NCBI taxonomy Id: 1401685
Other names: Anaplasmataceae bacterium L6, C. Xenolissoclinum pacificiensis L6, Candidatus Xenolissoclinum pacificiensis L6
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