STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7J2Q6Glycoside hydrolase. (249 aa)    
Predicted Functional Partners:
A0A1J7ILI6
Myosin regulatory light chain cdc4.
    
 0.609
A0A1J7IV59
DUF1348-domain-containing protein.
    
 0.609
A0A1J7J3Z0
EF-hand; Belongs to the calmodulin family.
    
 0.609
A0A1J7JKQ7
Calmodulin; Belongs to the calmodulin family.
    
 0.609
A0A1J7IUB3
Uncharacterized protein.
    
 0.607
A0A1J7IC37
BZIP domain-containing protein.
   
  0.599
A0A1J7IC60
CIA30-domain-containing protein.
   
  0.599
A0A1J7IJ13
Uncharacterized protein.
    
  0.599
A0A1J7IMB2
Uncharacterized protein.
    
  0.599
A0A1J7IYN9
mRNA triphosphatase CET1.
    
  0.599
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.