STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7J385Uncharacterized protein. (392 aa)    
Predicted Functional Partners:
A0A1J7J5M6
Uncharacterized protein.
   
 0.999
A0A1J7J6H1
WD40 repeat-like protein.
   
 0.999
A0A1J7JK18
Guanylate kinase-like domain-containing protein.
    
 0.999
A0A1J7ITJ0
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.981
A0A1J7IWY7
Uncharacterized protein.
   
 0.915
A0A1J7IYW5
Zn(2)-C6 fungal-type domain-containing protein.
   
 0.915
A0A1J7J1P9
G-patch_2 domain-containing protein.
   
 0.915
A0A1J7K1G3
C3H1-type domain-containing protein.
   
 0.915
A0A1J7IIV5
RRM domain-containing protein.
   
 0.902
A0A1J7JN85
RNA-binding domain-containing protein.
   
 0.902
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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