STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7JBR7Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. (739 aa)    
Predicted Functional Partners:
A0A1J7J2V1
Uncharacterized protein.
   
 0.996
A0A1J7J5Q8
Polyubiquitin.
    
  0.990
A0A1J7JB76
Uncharacterized protein.
  
0.990
A0A1J7J1B2
Vacuolar assembly/sorting protein.
    
 0.988
A0A1J7JN81
UEV-domain-containing protein.
    
 0.986
A0A1J7IC44
ARID domain-containing protein.
   
 0.985
A0A1J7JKN3
AP-1 complex subunit gamma.
    
 0.983
A0A1J7JYU4
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.959
A0A1J7IXC0
Uncharacterized protein.
    
  0.928
A0A1J7IC37
BZIP domain-containing protein.
    
  0.924
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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