STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7JGC9Got1 family protein. (139 aa)    
Predicted Functional Partners:
A0A1J7JGX3
Dihydroorotate dehydrogenase (fumarate); Catalyzes the conversion of dihydroorotate to orotate with fumarate as the electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily.
  
 
 0.984
A0A1J7JPR8
FMN-linked oxidoreductase.
  
 
 0.984
A0A1J7IK69
OMPdecase-domain-containing protein.
  
 
 0.969
A0A1J7JEK2
Orotate phosphoribosyltransferase.
  
 
 0.969
A0A1J7JNH1
Uncharacterized protein.
  
 
 0.969
A0A1J7IQ49
Purine permease.
  
  
 0.920
A0A1J7JFU7
Xanthine/uracil permease.
  
  
 0.920
A0A1J7J5C4
Small subunit of carbamoyl phosphate synthase.
  
  
 0.896
A0A1J7JPV0
PyrABCN.
  
  
 0.896
A0A1J7JZ29
Carbamoyl-phosphate synthase subunit arginine-specific large.
  
  
 0.896
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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