STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_7407Uncharacterized protein. (548 aa)    
Predicted Functional Partners:
T310_8009
Uncharacterized protein.
   
  
 0.928
T310_6514
Ubiquitin-like domain-containing protein.
    
   0.791
T310_6350
Ubiquitin.
    
   0.723
T310_0369
BZIP domain-containing protein.
    
   0.723
T310_9633
Uncharacterized protein.
  
   0.683
T310_5915
Ribonucleotide reductase.
     
 0.643
T310_1878
Nuclear pore complex subunit.
    
 
 0.603
T310_9152
eIF-4F a subunit of a mRNA cap-binding protein.
   
   0.600
T310_8174
Uncharacterized protein.
   
   0.600
T310_8025
Uncharacterized protein.
   
   0.600
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.