STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_3715AMID-like mitochondrial oxidoreductase. (406 aa)    
Predicted Functional Partners:
T310_2647
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
 0.911
T310_0155
Cytochrome c oxidase assembly protein cox15.
  
 0.815
T310_6100
Metallo-beta-lactamase domain protein.
  
 0.761
T310_4154
2Fe-2S iron-sulfur cluster binding domain protein.
  
 0.761
T310_1862
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
   
 0.725
T310_0624
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
     
 0.694
T310_10323
Uncharacterized protein.
   
 0.686
T310_10227
DAO domain-containing protein.
   
 0.686
T310_9580
Oxygen oxidoreductase.
   
 0.686
T310_8061
D-amino-acid oxidase.
   
 0.686
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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